Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.01□□□□□ -0.49
Col10a1Q05306 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col10a1Q05306 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Col10a1Q05306 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col10a1Q05306 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col10a1Q05306 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12□□□□□ -0.49
Col10a1Q05306 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col10a1Q05306 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col10a1Q05306 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12□□□□□ -0.49
Col10a1Q05306 Gm12539-201ENSMUST00000121549 1098 ntBASIC12□□□□□ -0.49
Col10a1Q05306 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12□□□□□ -0.49
Col10a1Q05306 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12□□□□□ -0.49
Col10a1Q05306 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12□□□□□ -0.49
Col10a1Q05306 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12□□□□□ -0.49
Col10a1Q05306 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Gm28693-202ENSMUST00000190758 331 ntBASIC12□□□□□ -0.49
Col10a1Q05306 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Col10a1Q05306 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12□□□□□ -0.49
Col10a1Q05306 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12□□□□□ -0.49
Col10a1Q05306 Gm29705-201ENSMUST00000212598 474 ntBASIC12□□□□□ -0.49
Col10a1Q05306 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Col10a1Q05306 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12□□□□□ -0.49
Col10a1Q05306 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col10a1Q05306 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Rubie-203ENSMUST00000227803 2430 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm15824-201ENSMUST00000119516 955 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm37497-201ENSMUST00000195830 798 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm6266-201ENSMUST00000203844 806 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.99□□□□□ -0.49
Col10a1Q05306 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col10a1Q05306 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.99□□□□□ -0.49
Col10a1Q05306 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms