Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox9Q04887 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox9Q04887 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Sox9Q04887 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox9Q04887 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox9Q04887 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Daam2-202ENSMUST00000224595 1926 ntBASIC13.41□□□□□ -0.26
Sox9Q04887 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sox9Q04887 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox9Q04887 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox9Q04887 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sox9Q04887 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sox9Q04887 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox9Q04887 Gm13047-201ENSMUST00000117116 815 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Gm13492-201ENSMUST00000119772 665 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Gm12029-201ENSMUST00000120073 832 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Gm11675-201ENSMUST00000121873 832 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox9Q04887 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox9Q04887 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox9Q04887 Gm17812-201ENSMUST00000204935 318 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox9Q04887 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sox9Q04887 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox9Q04887 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sox9Q04887 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Sox9Q04887 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.4□□□□□ -0.26
Sox9Q04887 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox9Q04887 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Sox9Q04887 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.4□□□□□ -0.27
Sox9Q04887 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.4□□□□□ -0.27
Sox9Q04887 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.39□□□□□ -0.27
Sox9Q04887 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.39□□□□□ -0.27
Sox9Q04887 Gm29155-201ENSMUST00000185910 269 ntBASIC13.39□□□□□ -0.27
Sox9Q04887 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox9Q04887 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox9Q04887 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox9Q04887 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox9Q04887 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox9Q04887 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox9Q04887 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox9Q04887 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms