Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12□□□□□ -0.49
Cacna1aP97445 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Gm5597-201ENSMUST00000182353 1193 ntBASIC12□□□□□ -0.49
Cacna1aP97445 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Gm8385-201ENSMUST00000058999 643 ntBASIC12□□□□□ -0.49
Cacna1aP97445 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12□□□□□ -0.49
Cacna1aP97445 Gm13611-201ENSMUST00000118269 318 ntBASIC12□□□□□ -0.49
Cacna1aP97445 Gm8908-201ENSMUST00000121633 1024 ntBASIC12□□□□□ -0.49
Cacna1aP97445 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12□□□□□ -0.49
Cacna1aP97445 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cacna1aP97445 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cacna1aP97445 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Cacna1aP97445 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.99□□□□□ -0.49
Cacna1aP97445 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cacna1aP97445 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.99□□□□□ -0.49
Cacna1aP97445 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Gm14109-201ENSMUST00000118814 309 ntBASIC11.99□□□□□ -0.49
Cacna1aP97445 Gm29155-201ENSMUST00000185910 269 ntBASIC11.99□□□□□ -0.49
Cacna1aP97445 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.99□□□□□ -0.49
Cacna1aP97445 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.99□□□□□ -0.49
Cacna1aP97445 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cacna1aP97445 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cacna1aP97445 Gm11531-201ENSMUST00000117614 555 ntBASIC11.99□□□□□ -0.49
Cacna1aP97445 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.99□□□□□ -0.49
Cacna1aP97445 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.99□□□□□ -0.49
Cacna1aP97445 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.99□□□□□ -0.49
Cacna1aP97445 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cacna1aP97445 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cacna1aP97445 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cacna1aP97445 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm12502-201ENSMUST00000120197 444 ntBASIC11.98□□□□□ -0.49
Cacna1aP97445 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm17208-201ENSMUST00000168388 535 ntBASIC11.98□□□□□ -0.49
Cacna1aP97445 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm45224-201ENSMUST00000208203 414 ntBASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.98□□□□□ -0.49
Cacna1aP97445 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Cacna1aP97445 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cacna1aP97445 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms