Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ldb1P70662 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ldb1P70662 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ldb1P70662 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ldb1P70662 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Gm6458-201ENSMUST00000211573 635 ntBASIC12.94□□□□□ -0.34
Ldb1P70662 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ldb1P70662 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.94□□□□□ -0.34
Ldb1P70662 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ldb1P70662 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ldb1P70662 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ldb1P70662 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ldb1P70662 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.93□□□□□ -0.34
Ldb1P70662 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.93□□□□□ -0.34
Ldb1P70662 Gm6244-201ENSMUST00000178732 841 ntBASIC12.93□□□□□ -0.34
Ldb1P70662 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.93□□□□□ -0.34
Ldb1P70662 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.93□□□□□ -0.34
Ldb1P70662 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Ldb1P70662 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.93□□□□□ -0.34
Ldb1P70662 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ldb1P70662 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.93□□□□□ -0.34
Ldb1P70662 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.93□□□□□ -0.34
Ldb1P70662 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ldb1P70662 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb1P70662 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb1P70662 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.92□□□□□ -0.34
Ldb1P70662 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms