Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ybx1P62960 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.3□□□□□ -0.28
Ybx1P62960 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Gm23270-201ENSMUST00000104055 131 ntBASIC13.3□□□□□ -0.28
Ybx1P62960 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.3□□□□□ -0.28
Ybx1P62960 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.3□□□□□ -0.28
Ybx1P62960 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ybx1P62960 Gm31256-201ENSMUST00000194705 506 ntBASIC13.3□□□□□ -0.28
Ybx1P62960 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.3□□□□□ -0.28
Ybx1P62960 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Rps4l-202ENSMUST00000204242 789 ntBASIC13.3□□□□□ -0.28
Ybx1P62960 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.3□□□□□ -0.28
Ybx1P62960 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.3□□□□□ -0.28
Ybx1P62960 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ybx1P62960 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm14704-201ENSMUST00000120300 874 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 Gm24990-201ENSMUST00000157406 323 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm5950-201ENSMUST00000213337 772 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.29□□□□□ -0.28
Ybx1P62960 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ybx1P62960 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ybx1P62960 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ybx1P62960 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.28□□□□□ -0.28
Ybx1P62960 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.28□□□□□ -0.28
Ybx1P62960 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.28□□□□□ -0.28
Ybx1P62960 Gm13875-201ENSMUST00000120162 282 ntBASIC13.28□□□□□ -0.28
Ybx1P62960 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ybx1P62960 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ybx1P62960 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Gm26956-201ENSMUST00000182176 986 ntBASIC13.28□□□□□ -0.28
Ybx1P62960 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.28□□□□□ -0.28
Ybx1P62960 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms