Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.29□□□□□ -0.44
Nup43P59235 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup43P59235 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nup43P59235 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.28□□□□□ -0.44
Nup43P59235 Gm16479-201ENSMUST00000121706 932 ntBASIC12.28□□□□□ -0.44
Nup43P59235 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.28□□□□□ -0.44
Nup43P59235 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Gm26185-201ENSMUST00000157692 266 ntBASIC12.28□□□□□ -0.44
Nup43P59235 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.28□□□□□ -0.44
Nup43P59235 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Gm43818-201ENSMUST00000200605 466 ntBASIC12.28□□□□□ -0.44
Nup43P59235 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.28□□□□□ -0.44
Nup43P59235 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.28□□□□□ -0.44
Nup43P59235 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.28□□□□□ -0.44
Nup43P59235 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup43P59235 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup43P59235 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.27□□□□□ -0.44
Nup43P59235 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.27□□□□□ -0.44
Nup43P59235 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup43P59235 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.27□□□□□ -0.45
Nup43P59235 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Mir686-201ENSMUST00000102174 109 ntBASIC12.27□□□□□ -0.45
Nup43P59235 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Nup43P59235 Gm16177-201ENSMUST00000120728 718 ntBASIC12.27□□□□□ -0.45
Nup43P59235 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nup43P59235 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Nup43P59235 Gm5186-201ENSMUST00000218781 920 ntBASIC12.27□□□□□ -0.45
Nup43P59235 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.27□□□□□ -0.45
Nup43P59235 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.27□□□□□ -0.45
Nup43P59235 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.27□□□□□ -0.45
Nup43P59235 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.27□□□□□ -0.45
Nup43P59235 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup43P59235 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.27□□□□□ -0.45
Nup43P59235 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms