Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Gm14667-201ENSMUST00000119448 1350 ntBASIC15.32■□□□□ 0.04
LtbrP50284 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LtbrP50284 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.32■□□□□ 0.04
LtbrP50284 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LtbrP50284 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LtbrP50284 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LtbrP50284 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LtbrP50284 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.31■□□□□ 0.04
LtbrP50284 Gm14201-201ENSMUST00000117627 289 ntBASIC15.31■□□□□ 0.04
LtbrP50284 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC15.31■□□□□ 0.04
LtbrP50284 Gm8738-201ENSMUST00000172606 329 ntBASIC15.31■□□□□ 0.04
LtbrP50284 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LtbrP50284 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.31■□□□□ 0.04
LtbrP50284 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LtbrP50284 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.31■□□□□ 0.04
LtbrP50284 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LtbrP50284 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.31■□□□□ 0.04
LtbrP50284 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.31■□□□□ 0.04
LtbrP50284 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LtbrP50284 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
LtbrP50284 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Gm16202-201ENSMUST00000117532 544 ntBASIC15.3■□□□□ 0.04
LtbrP50284 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.3■□□□□ 0.04
LtbrP50284 Gm13813-201ENSMUST00000120998 787 ntBASIC15.3■□□□□ 0.04
LtbrP50284 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.3■□□□□ 0.04
LtbrP50284 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LtbrP50284 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LtbrP50284 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.3■□□□□ 0.04
LtbrP50284 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.3■□□□□ 0.04
LtbrP50284 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.3■□□□□ 0.04
LtbrP50284 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LtbrP50284 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.3■□□□□ 0.04
LtbrP50284 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LtbrP50284 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
LtbrP50284 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LtbrP50284 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LtbrP50284 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.29■□□□□ 0.04
LtbrP50284 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LtbrP50284 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Gm23200-201ENSMUST00000104379 132 ntBASIC15.29■□□□□ 0.04
LtbrP50284 Gm8566-201ENSMUST00000120174 465 ntBASIC15.29■□□□□ 0.04
LtbrP50284 Gm13665-201ENSMUST00000120830 528 ntBASIC15.29■□□□□ 0.04
LtbrP50284 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.29■□□□□ 0.04
LtbrP50284 Gm26185-201ENSMUST00000157692 266 ntBASIC15.29■□□□□ 0.04
LtbrP50284 Gm9550-201ENSMUST00000161130 862 ntBASIC15.29■□□□□ 0.04
LtbrP50284 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LtbrP50284 Gm38216-201ENSMUST00000194872 1214 ntBASIC15.29■□□□□ 0.04
LtbrP50284 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms