Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Mmp3P28862 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.88□□□□□ -0.19
Mmp3P28862 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Mmp3P28862 Gm25214-201ENSMUST00000104573 129 ntBASIC13.88□□□□□ -0.19
Mmp3P28862 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Mmp3P28862 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Gm11531-201ENSMUST00000117614 555 ntBASIC13.88□□□□□ -0.19
Mmp3P28862 Gm13875-201ENSMUST00000120162 282 ntBASIC13.88□□□□□ -0.19
Mmp3P28862 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Gm25668-201ENSMUST00000157700 129 ntBASIC13.88□□□□□ -0.19
Mmp3P28862 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Mmp3P28862 Gm2546-201ENSMUST00000182630 991 ntBASIC13.88□□□□□ -0.19
Mmp3P28862 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.88□□□□□ -0.19
Mmp3P28862 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.88□□□□□ -0.19
Mmp3P28862 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.88□□□□□ -0.19
Mmp3P28862 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Mmp3P28862 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Mmp3P28862 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp3P28862 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Mmp3P28862 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Mmp3P28862 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.87□□□□□ -0.19
Mmp3P28862 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Gm14726-201ENSMUST00000120623 896 ntBASIC13.87□□□□□ -0.19
Mmp3P28862 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.87□□□□□ -0.19
Mmp3P28862 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Mmp3P28862 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Gm26956-201ENSMUST00000182176 986 ntBASIC13.87□□□□□ -0.19
Mmp3P28862 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.87□□□□□ -0.19
Mmp3P28862 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Mir339-201ENSMUST00000083659 96 ntBASIC13.87□□□□□ -0.19
Mmp3P28862 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Mmp3P28862 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.87□□□□□ -0.19
Mmp3P28862 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp3P28862 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.87□□□□□ -0.19
Mmp3P28862 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Mmp3P28862 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp3P28862 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp3P28862 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp3P28862 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Mmp3P28862 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Mmp3P28862 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.86□□□□□ -0.19
Mmp3P28862 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp3P28862 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Mmp3P28862 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Mmp3P28862 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Mmp3P28862 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp3P28862 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp3P28862 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp3P28862 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.86□□□□□ -0.19
Mmp3P28862 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.86□□□□□ -0.19
Mmp3P28862 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Mmp3P28862 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.86□□□□□ -0.19
Mmp3P28862 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.86□□□□□ -0.19
Mmp3P28862 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp3P28862 Gm5950-201ENSMUST00000213337 772 ntBASIC13.86□□□□□ -0.19
Mmp3P28862 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.86□□□□□ -0.19
Mmp3P28862 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms