Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nfkb1P25799 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nfkb1P25799 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Nfkb1P25799 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nfkb1P25799 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nfkb1P25799 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Nfkb1P25799 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.37□□□□□ -0.27
Nfkb1P25799 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.36□□□□□ -0.27
Nfkb1P25799 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nfkb1P25799 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.36□□□□□ -0.27
Nfkb1P25799 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.36□□□□□ -0.27
Nfkb1P25799 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.36□□□□□ -0.27
Nfkb1P25799 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.36□□□□□ -0.27
Nfkb1P25799 Gm13342-201ENSMUST00000121055 207 ntBASIC13.36□□□□□ -0.27
Nfkb1P25799 Gm13786-201ENSMUST00000122371 333 ntBASIC13.36□□□□□ -0.27
Nfkb1P25799 Gm7584-201ENSMUST00000175829 940 ntBASIC13.36□□□□□ -0.27
Nfkb1P25799 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.36□□□□□ -0.27
Nfkb1P25799 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.36□□□□□ -0.27
Nfkb1P25799 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nfkb1P25799 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nfkb1P25799 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nfkb1P25799 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Nfkb1P25799 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Gm12241-201ENSMUST00000118330 726 ntBASIC13.35□□□□□ -0.27
Nfkb1P25799 Gm13350-201ENSMUST00000120519 479 ntBASIC13.35□□□□□ -0.27
Nfkb1P25799 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.35□□□□□ -0.27
Nfkb1P25799 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nfkb1P25799 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.35□□□□□ -0.27
Nfkb1P25799 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.35□□□□□ -0.27
Nfkb1P25799 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.35□□□□□ -0.27
Nfkb1P25799 Gm32025-201ENSMUST00000217960 307 ntBASIC13.35□□□□□ -0.27
Nfkb1P25799 Gm9257-201ENSMUST00000221254 232 ntBASIC13.35□□□□□ -0.27
Nfkb1P25799 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nfkb1P25799 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nfkb1P25799 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.35□□□□□ -0.27
Nfkb1P25799 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nfkb1P25799 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.35□□□□□ -0.27
Nfkb1P25799 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.34□□□□□ -0.27
Nfkb1P25799 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.34□□□□□ -0.27
Nfkb1P25799 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Gm15370-201ENSMUST00000117158 253 ntBASIC13.34□□□□□ -0.27
Nfkb1P25799 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.34□□□□□ -0.27
Nfkb1P25799 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.34□□□□□ -0.27
Nfkb1P25799 Mir7221-201ENSMUST00000184009 72 ntBASIC13.34□□□□□ -0.27
Nfkb1P25799 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Nfkb1P25799 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Gm43758-201ENSMUST00000199500 367 ntBASIC13.34□□□□□ -0.27
Nfkb1P25799 Gm18584-201ENSMUST00000203098 964 ntBASIC13.34□□□□□ -0.27
Nfkb1P25799 Gm7783-201ENSMUST00000204795 781 ntBASIC13.34□□□□□ -0.27
Nfkb1P25799 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nfkb1P25799 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms