Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
P04212 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.58□□□□□ -0.72
P04212 Gm22189-201ENSMUST00000103822 86 ntBASIC10.58□□□□□ -0.72
P04212 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.58□□□□□ -0.72
P04212 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
P04212 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.58□□□□□ -0.72
P04212 Gm5354-201ENSMUST00000182417 973 ntBASIC10.58□□□□□ -0.72
P04212 Gm42550-201ENSMUST00000201553 960 ntBASIC10.58□□□□□ -0.72
P04212 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
P04212 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.58□□□□□ -0.72
P04212 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.58□□□□□ -0.72
P04212 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.58□□□□□ -0.72
P04212 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04212 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
P04212 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P04212 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.57□□□□□ -0.72
P04212 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.57□□□□□ -0.72
P04212 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.57□□□□□ -0.72
P04212 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P04212 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.57□□□□□ -0.72
P04212 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.57□□□□□ -0.72
P04212 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P04212 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P04212 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04212 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.56□□□□□ -0.72
P04212 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.56□□□□□ -0.72
P04212 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.56□□□□□ -0.72
P04212 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P04212 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.56□□□□□ -0.72
P04212 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.56□□□□□ -0.72
P04212 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.56□□□□□ -0.72
P04212 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms