Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf13O54965 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.8□□□□□ -0.52
Rnf13O54965 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf13O54965 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf13O54965 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rnf13O54965 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf13O54965 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf13O54965 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rnf13O54965 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Rnf13O54965 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.79□□□□□ -0.52
Rnf13O54965 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf13O54965 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.79□□□□□ -0.52
Rnf13O54965 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rnf13O54965 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.79□□□□□ -0.52
Rnf13O54965 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf13O54965 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.78□□□□□ -0.52
Rnf13O54965 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf13O54965 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rnf13O54965 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf13O54965 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.78□□□□□ -0.52
Rnf13O54965 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.78□□□□□ -0.52
Rnf13O54965 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf13O54965 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf13O54965 Gm29608-201ENSMUST00000190444 463 ntBASIC11.78□□□□□ -0.52
Rnf13O54965 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.78□□□□□ -0.52
Rnf13O54965 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf13O54965 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf13O54965 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf13O54965 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Rnf13O54965 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf13O54965 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms