Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smarce1O54941 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.45■□□□□ 0.06
Smarce1O54941 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Smarce1O54941 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smarce1O54941 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smarce1O54941 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.45■□□□□ 0.06
Smarce1O54941 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.45■□□□□ 0.06
Smarce1O54941 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.45■□□□□ 0.06
Smarce1O54941 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.45■□□□□ 0.06
Smarce1O54941 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.45■□□□□ 0.06
Smarce1O54941 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smarce1O54941 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Smarce1O54941 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.45■□□□□ 0.06
Smarce1O54941 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.45■□□□□ 0.06
Smarce1O54941 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.45■□□□□ 0.06
Smarce1O54941 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smarce1O54941 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarce1O54941 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.44■□□□□ 0.06
Smarce1O54941 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smarce1O54941 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Smarce1O54941 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.44■□□□□ 0.06
Smarce1O54941 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.44■□□□□ 0.06
Smarce1O54941 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smarce1O54941 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smarce1O54941 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.44■□□□□ 0.06
Smarce1O54941 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.44■□□□□ 0.06
Smarce1O54941 Gm7730-201ENSMUST00000212486 454 ntBASIC15.44■□□□□ 0.06
Smarce1O54941 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.44■□□□□ 0.06
Smarce1O54941 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarce1O54941 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smarce1O54941 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.43■□□□□ 0.06
Smarce1O54941 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Smarce1O54941 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Gm11978-201ENSMUST00000122315 466 ntBASIC15.43■□□□□ 0.06
Smarce1O54941 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Smarce1O54941 Gm42612-201ENSMUST00000197986 623 ntBASIC15.43■□□□□ 0.06
Smarce1O54941 Gm43170-201ENSMUST00000199827 612 ntBASIC15.43■□□□□ 0.06
Smarce1O54941 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.43■□□□□ 0.06
Smarce1O54941 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.43■□□□□ 0.06
Smarce1O54941 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarce1O54941 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smarce1O54941 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.43■□□□□ 0.06
Smarce1O54941 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.43■□□□□ 0.06
Smarce1O54941 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.42■□□□□ 0.06
Smarce1O54941 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Smarce1O54941 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.42■□□□□ 0.06
Smarce1O54941 Gm13689-201ENSMUST00000119360 685 ntBASIC15.42■□□□□ 0.06
Smarce1O54941 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.42■□□□□ 0.06
Smarce1O54941 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.42■□□□□ 0.06
Smarce1O54941 Gm44397-201ENSMUST00000195950 113 ntBASIC15.42■□□□□ 0.06
Smarce1O54941 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms