Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 HTR5BP-201ENST00000430851 1154 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 ACTG1P14-201ENST00000446382 1122 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 RN7SL589P-201ENST00000481268 310 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 ALG1L5P-201ENST00000482043 771 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 AC105233.2-201ENST00000523697 349 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 AF228730.5-201ENST00000530288 346 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
UPK1AO00322 AL365330.1-201ENST00000607459 531 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 AC026120.1-201ENST00000611536 926 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 AC008267.7-201ENST00000624570 1194 ntBASIC15.22■□□□□ 0.03
UPK1AO00322 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UPK1AO00322 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
UPK1AO00322 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
UPK1AO00322 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK1AO00322 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 AP003680.1-201ENST00000598970 3660 ntBASIC15.21■□□□□ 0.03
UPK1AO00322 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
UPK1AO00322 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
UPK1AO00322 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.21■□□□□ 0.03
UPK1AO00322 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.21■□□□□ 0.03
UPK1AO00322 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.21■□□□□ 0.03
UPK1AO00322 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 KRT8P48-201ENST00000515599 1220 ntBASIC15.21■□□□□ 0.03
UPK1AO00322 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.21■□□□□ 0.03
UPK1AO00322 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 AC027307.2-201ENST00000591252 911 ntBASIC15.21■□□□□ 0.03
UPK1AO00322 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK1AO00322 FOXO1B-201ENST00000504678 1527 ntBASIC15.21■□□□□ 0.03
UPK1AO00322 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK1AO00322 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UPK1AO00322 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK1AO00322 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms