Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm24990-201ENSMUST00000157406 323 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm2260-201ENSMUST00000184965 657 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm44262-201ENSMUST00000204969 372 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm19994-201ENSMUST00000217086 586 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm8385-201ENSMUST00000058999 643 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Gm14028-201ENSMUST00000117434 479 ntBASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Mir6927-201ENSMUST00000184494 71 ntBASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn3aA2ASI5 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Gm15703-201ENSMUST00000120250 880 ntBASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Gm25732-201ENSMUST00000175168 60 ntBASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Gm26461-201ENSMUST00000175064 290 ntBASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scn3aA2ASI5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms