Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc194A0A140LIT1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Gm18307-201ENSMUST00000206864 949 ntBASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc194A0A140LIT1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Gm6218-201ENSMUST00000219812 628 ntBASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc194A0A140LIT1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Gm13689-201ENSMUST00000119360 685 ntBASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Gm44855-201ENSMUST00000205725 362 ntBASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc194A0A140LIT1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms