Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm9719-201ENSMUST00000162765 543 ntBASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm18206-201ENSMUST00000207027 926 ntBASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm5425-201ENSMUST00000214125 459 ntBASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm11745-201ENSMUST00000121669 448 ntBASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm18889-201ENSMUST00000174284 929 ntBASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Gm10175-201ENSMUST00000086013 645 ntBASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms