Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm8731-201ENSMUST00000118088 412 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Gm2875-201ENSMUST00000211333 360 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a4Q9QZR9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Gm37299-201ENSMUST00000193951 826 ntBASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Gm42657-201ENSMUST00000201746 211 ntBASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a4Q9QZR9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Gm12407-201ENSMUST00000180219 324 ntBASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Gm3551-201ENSMUST00000190750 664 ntBASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col4a4Q9QZR9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm15352-201ENSMUST00000118696 270 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm15566-201ENSMUST00000121130 590 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms