Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Gm7399-201ENSMUST00000032395 858 ntBASIC14.69□□□□□ -0.06
Smco2Q9DA21 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.69□□□□□ -0.06
Smco2Q9DA21 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.69□□□□□ -0.06
Smco2Q9DA21 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smco2Q9DA21 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.68□□□□□ -0.06
Smco2Q9DA21 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.68□□□□□ -0.06
Smco2Q9DA21 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm2231-201ENSMUST00000125661 612 ntBASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm7029-201ENSMUST00000173226 450 ntBASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm37008-201ENSMUST00000195712 319 ntBASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm6013-201ENSMUST00000212264 699 ntBASIC14.68□□□□□ -0.06
Smco2Q9DA21 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.68□□□□□ -0.06
Smco2Q9DA21 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco2Q9DA21 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Gm22018-201ENSMUST00000104357 131 ntBASIC14.67□□□□□ -0.06
Smco2Q9DA21 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.67□□□□□ -0.06
Smco2Q9DA21 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.67□□□□□ -0.06
Smco2Q9DA21 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.67□□□□□ -0.06
Smco2Q9DA21 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.67□□□□□ -0.06
Smco2Q9DA21 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smco2Q9DA21 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms