Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tmem54Q9D7S1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Gm26185-201ENSMUST00000157692 266 ntBASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tmem54Q9D7S1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tmem54Q9D7S1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms