Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 Gm5867-201ENSMUST00000063197 592 ntBASIC14.21□□□□□ -0.13
Ssr1Q9CY50 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssr1Q9CY50 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Ssr1Q9CY50 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssr1Q9CY50 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ssr1Q9CY50 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ssr1Q9CY50 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.21□□□□□ -0.14
Ssr1Q9CY50 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Mir874-201ENSMUST00000104769 76 ntBASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Gm27306-201ENSMUST00000183970 107 ntBASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
Ssr1Q9CY50 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm44913-201ENSMUST00000208060 2990 ntBASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssr1Q9CY50 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Gm12485-201ENSMUST00000119641 291 ntBASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Mir8102-201ENSMUST00000184148 139 ntBASIC14.18□□□□□ -0.14
Ssr1Q9CY50 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Gm9797-201ENSMUST00000052902 613 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms