Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn1Q9CWM4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn1Q9CWM4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn1Q9CWM4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms