Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cldnd1Q9CQX5 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gm11597-201ENSMUST00000121423 964 ntBASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gm12208-201ENSMUST00000122004 163 ntBASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gm12134-201ENSMUST00000122109 520 ntBASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cldnd1Q9CQX5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cldnd1Q9CQX5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms