Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.3□□□□□ -0.76
Cotl1Q9CQI6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gm43112-201ENSMUST00000196665 3122 ntBASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gm12882-201ENSMUST00000121696 517 ntBASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gm18057-201ENSMUST00000208220 503 ntBASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cotl1Q9CQI6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Gm15467-201ENSMUST00000120582 445 ntBASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Gm38225-201ENSMUST00000194001 393 ntBASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cotl1Q9CQI6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms