Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ska1Q9CPV1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Mir7684-201ENSMUST00000183858 60 ntBASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Mir8102-201ENSMUST00000184148 139 ntBASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.32□□□□□ -0.44
Ska1Q9CPV1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ska1Q9CPV1 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.31□□□□□ -0.44
Ska1Q9CPV1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Gm27989-201ENSMUST00000184721 107 ntBASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ska1Q9CPV1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms