Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gm20482-202ENSMUST00000174729 825 ntBASIC11.44□□□□□ -0.58
Scrt1Q99M85 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.44□□□□□ -0.58
Scrt1Q99M85 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Scrt1Q99M85 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm8805-201ENSMUST00000117848 313 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm11591-201ENSMUST00000120063 702 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm12403-201ENSMUST00000121384 959 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm13123-201ENSMUST00000122173 492 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 B9d1os-201ENSMUST00000137010 674 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm25668-201ENSMUST00000157700 129 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm16379-201ENSMUST00000161469 348 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm27341-201ENSMUST00000183570 106 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Mir6979-201ENSMUST00000183927 56 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm8762-201ENSMUST00000193486 339 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.43□□□□□ -0.58
Scrt1Q99M85 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scrt1Q99M85 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms