Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd3Q99LE3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd3Q99LE3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lysmd3Q99LE3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd3Q99LE3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd3Q99LE3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd3Q99LE3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd3Q99LE3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd3Q99LE3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd3Q99LE3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd3Q99LE3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd3Q99LE3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm38002-201ENSMUST00000193255 180 ntBASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm37042-201ENSMUST00000193816 581 ntBASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm18054-201ENSMUST00000207539 555 ntBASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm9823-201ENSMUST00000051212 327 ntBASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd3Q99LE3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gm25261-201ENSMUST00000157416 134 ntBASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gm6222-202ENSMUST00000182143 629 ntBASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gm4768-201ENSMUST00000206199 686 ntBASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd3Q99LE3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms