Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.97□□□□□ -0.33
Pcdhb4Q91XZ6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Gm19220-201ENSMUST00000222682 803 ntBASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb4Q91XZ6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb4Q91XZ6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms