Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb17Q91VD8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm8463-201ENSMUST00000208573 613 ntBASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm7653-201ENSMUST00000214567 508 ntBASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb17Q91VD8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb17Q91VD8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm5530-201ENSMUST00000117185 985 ntBASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm5745-201ENSMUST00000183748 313 ntBASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm21301-201ENSMUST00000189476 699 ntBASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Trdv3-201ENSMUST00000198551 309 ntBASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm19169-201ENSMUST00000220109 1246 ntBASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 AC123735.1-201ENSMUST00000227358 605 ntBASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb17Q91VD8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms