Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Vps39Q8R5L3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Mir6977-201ENSMUST00000184960 64 ntBASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Mir7654-201ENSMUST00000185082 70 ntBASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Gm37917-201ENSMUST00000194711 392 ntBASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps39Q8R5L3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Mir6392-201ENSMUST00000184924 108 ntBASIC13.04□□□□□ -0.32
Vps39Q8R5L3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Gm18624-201ENSMUST00000220966 658 ntBASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vps39Q8R5L3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps39Q8R5L3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms