Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Map1b-203ENSMUST00000223725 2669 ntBASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf4Q8K4J2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ebf4Q8K4J2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ebf4Q8K4J2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm12403-201ENSMUST00000121384 959 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm9727-201ENSMUST00000161387 555 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf4Q8K4J2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms