Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim68Q8K243 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim68Q8K243 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim68Q8K243 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Gm38158-201ENSMUST00000194617 339 ntBASIC14.16□□□□□ -0.14
Trim68Q8K243 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.16□□□□□ -0.14
Trim68Q8K243 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim68Q8K243 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.16□□□□□ -0.14
Trim68Q8K243 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Trim68Q8K243 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim68Q8K243 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Gm6023-201ENSMUST00000118217 606 ntBASIC14.15□□□□□ -0.14
Trim68Q8K243 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.15□□□□□ -0.14
Trim68Q8K243 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim68Q8K243 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim68Q8K243 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.14□□□□□ -0.15
Trim68Q8K243 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim68Q8K243 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trim68Q8K243 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim68Q8K243 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim68Q8K243 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim68Q8K243 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms