Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Gm8410-201ENSMUST00000117225 605 ntBASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm12403-201ENSMUST00000121384 959 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm25144-201ENSMUST00000179561 110 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm25352-201ENSMUST00000179815 110 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.87□□□□□ -0.35
Ccdc28bQ8CEG5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc28bQ8CEG5 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms