Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pabpn1Q8CCS6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pabpn1Q8CCS6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pabpn1Q8CCS6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pabpn1Q8CCS6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm11578-201ENSMUST00000118530 459 ntBASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm17214-201ENSMUST00000164501 541 ntBASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm6644-201ENSMUST00000186507 951 ntBASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 AC121357.1-201ENSMUST00000227365 608 ntBASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 AC137950.2-202ENSMUST00000227150 1635 ntBASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pabpn1Q8CCS6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Gm11663-201ENSMUST00000117888 290 ntBASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Gm11836-201ENSMUST00000121022 441 ntBASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Gm20414-201ENSMUST00000172918 646 ntBASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pabpn1Q8CCS6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Gm22594-201ENSMUST00000104251 130 ntBASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Gm26134-201ENSMUST00000178484 110 ntBASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Gm28686-201ENSMUST00000187404 609 ntBASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Tmed9-203ENSMUST00000224741 1450 ntBASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC19.7■□□□□ 0.74
Pabpn1Q8CCS6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Gm5555-201ENSMUST00000120352 1111 ntBASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Gm42629-201ENSMUST00000199063 1102 ntBASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pabpn1Q8CCS6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms