Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.26□□□□□ -0.13
Ush1gQ80T11 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.26□□□□□ -0.13
Ush1gQ80T11 Gm6082-201ENSMUST00000215204 454 ntBASIC14.26□□□□□ -0.13
Ush1gQ80T11 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm26185-201ENSMUST00000157692 266 ntBASIC14.25□□□□□ -0.13
Ush1gQ80T11 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.25□□□□□ -0.13
Ush1gQ80T11 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.25□□□□□ -0.13
Ush1gQ80T11 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm38158-201ENSMUST00000194617 339 ntBASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm5363-201ENSMUST00000211927 938 ntBASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ush1gQ80T11 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gm8805-201ENSMUST00000117848 313 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gm11222-201ENSMUST00000119005 738 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gm7809-201ENSMUST00000153199 742 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gm17376-201ENSMUST00000166016 84 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gm2383-201ENSMUST00000181461 807 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ush1gQ80T11 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.24□□□□□ -0.13
Ush1gQ80T11 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ush1gQ80T11 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ush1gQ80T11 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ush1gQ80T11 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ush1gQ80T11 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ush1gQ80T11 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms