Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Gm10608-202ENSMUST00000213924 676 ntBASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Gm9257-201ENSMUST00000221254 232 ntBASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88cQ6VGS5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm11964-201ENSMUST00000120982 444 ntBASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm13316-201ENSMUST00000140537 691 ntBASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm44364-201ENSMUST00000198368 141 ntBASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88cQ6VGS5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm11222-201ENSMUST00000119005 738 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm4986-201ENSMUST00000119731 549 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm8099-201ENSMUST00000200510 742 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm22058-201ENSMUST00000083393 310 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm13342-201ENSMUST00000121055 207 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.36□□□□□ -0.11
Ccdc88cQ6VGS5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88cQ6VGS5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms