Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Gm28760-201ENSMUST00000185995 736 ntBASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Gm42550-201ENSMUST00000201553 960 ntBASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Gm6218-201ENSMUST00000219812 628 ntBASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt39Q6IFX4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Gm22189-201ENSMUST00000103822 86 ntBASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Gm7488-201ENSMUST00000117148 684 ntBASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Gm13689-201ENSMUST00000119360 685 ntBASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.38□□□□□ -0.11
Krt39Q6IFX4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt39Q6IFX4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms