Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Col11a2Q64739 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Col11a2Q64739 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Col11a2Q64739 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Gm37028-201ENSMUST00000194276 107 ntBASIC15.39■□□□□ 0.05
Col11a2Q64739 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Col11a2Q64739 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col11a2Q64739 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col11a2Q64739 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Gm9132-201ENSMUST00000210182 832 ntBASIC15.38■□□□□ 0.05
Col11a2Q64739 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.38■□□□□ 0.05
Col11a2Q64739 AC154176.1-201ENSMUST00000225897 220 ntBASIC15.38■□□□□ 0.05
Col11a2Q64739 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.38■□□□□ 0.05
Col11a2Q64739 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Sybu-209ENSMUST00000228639 4113 ntBASIC15.38■□□□□ 0.05
Col11a2Q64739 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Col11a2Q64739 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a2Q64739 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Gm13047-201ENSMUST00000117116 815 ntBASIC15.37■□□□□ 0.05
Col11a2Q64739 Mir1901-201ENSMUST00000122616 78 ntBASIC15.37■□□□□ 0.05
Col11a2Q64739 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Gm25072-201ENSMUST00000175233 235 ntBASIC15.37■□□□□ 0.05
Col11a2Q64739 Gm9358-201ENSMUST00000183067 927 ntBASIC15.37■□□□□ 0.05
Col11a2Q64739 Mir8115-201ENSMUST00000184992 119 ntBASIC15.37■□□□□ 0.05
Col11a2Q64739 Gm29155-201ENSMUST00000185910 269 ntBASIC15.37■□□□□ 0.05
Col11a2Q64739 Gm43184-201ENSMUST00000197247 542 ntBASIC15.37■□□□□ 0.05
Col11a2Q64739 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a2Q64739 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.37■□□□□ 0.05
Col11a2Q64739 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Col11a2Q64739 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col11a2Q64739 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.36■□□□□ 0.05
Col11a2Q64739 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Col11a2Q64739 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.36■□□□□ 0.05
Col11a2Q64739 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.36■□□□□ 0.05
Col11a2Q64739 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.36■□□□□ 0.05
Col11a2Q64739 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.36■□□□□ 0.05
Col11a2Q64739 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a2Q64739 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms