Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.56□□□□□ -0.4
Sdc3Q64519 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sdc3Q64519 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.55□□□□□ -0.4
Sdc3Q64519 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Gm43818-201ENSMUST00000200605 466 ntBASIC12.55□□□□□ -0.4
Sdc3Q64519 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sdc3Q64519 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sdc3Q64519 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.55□□□□□ -0.4
Sdc3Q64519 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc3Q64519 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sdc3Q64519 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sdc3Q64519 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.54□□□□□ -0.4
Sdc3Q64519 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.54□□□□□ -0.4
Sdc3Q64519 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Gm43630-201ENSMUST00000201550 776 ntBASIC12.54□□□□□ -0.4
Sdc3Q64519 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.54□□□□□ -0.4
Sdc3Q64519 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.54□□□□□ -0.4
Sdc3Q64519 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Sdc3Q64519 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.54□□□□□ -0.4
Sdc3Q64519 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Sdc3Q64519 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sdc3Q64519 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.54□□□□□ -0.4
Sdc3Q64519 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.54□□□□□ -0.4
Sdc3Q64519 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc3Q64519 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.54□□□□□ -0.4
Sdc3Q64519 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sdc3Q64519 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sdc3Q64519 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Sdc3Q64519 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm16202-201ENSMUST00000117532 544 ntBASIC12.53□□□□□ -0.4
Sdc3Q64519 Gm11618-201ENSMUST00000117946 267 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms