Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
VcanQ62059 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
VcanQ62059 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.89□□□□□ -0.51
VcanQ62059 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Gm19994-201ENSMUST00000217086 586 ntBASIC11.89□□□□□ -0.51
VcanQ62059 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.89□□□□□ -0.51
VcanQ62059 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.89□□□□□ -0.51
VcanQ62059 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
VcanQ62059 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.89□□□□□ -0.51
VcanQ62059 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.88□□□□□ -0.51
VcanQ62059 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.88□□□□□ -0.51
VcanQ62059 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.88□□□□□ -0.51
VcanQ62059 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
VcanQ62059 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.88□□□□□ -0.51
VcanQ62059 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.88□□□□□ -0.51
VcanQ62059 Gm17827-201ENSMUST00000211825 742 ntBASIC11.88□□□□□ -0.51
VcanQ62059 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.88□□□□□ -0.51
VcanQ62059 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.88□□□□□ -0.51
VcanQ62059 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.88□□□□□ -0.51
VcanQ62059 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
VcanQ62059 Gm15003-201ENSMUST00000118884 446 ntBASIC11.88□□□□□ -0.51
VcanQ62059 Gm9507-202ENSMUST00000180157 654 ntBASIC11.88□□□□□ -0.51
VcanQ62059 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Gm17831-201ENSMUST00000205579 900 ntBASIC11.88□□□□□ -0.51
VcanQ62059 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.88□□□□□ -0.51
VcanQ62059 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
VcanQ62059 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VcanQ62059 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VcanQ62059 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 Gm15595-201ENSMUST00000120840 961 ntBASIC11.87□□□□□ -0.51
VcanQ62059 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.87□□□□□ -0.51
VcanQ62059 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 Gm6485-201ENSMUST00000160676 439 ntBASIC11.87□□□□□ -0.51
VcanQ62059 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.87□□□□□ -0.51
VcanQ62059 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
VcanQ62059 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
VcanQ62059 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms