Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rai1Q61818 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rai1Q61818 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rai1Q61818 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rai1Q61818 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Rai1Q61818 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rai1Q61818 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.4□□□□□ -0.42
Rai1Q61818 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.4□□□□□ -0.42
Rai1Q61818 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rai1Q61818 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Rai1Q61818 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rai1Q61818 Gm7467-201ENSMUST00000185173 652 ntBASIC12.4□□□□□ -0.42
Rai1Q61818 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rai1Q61818 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.4□□□□□ -0.42
Rai1Q61818 Gm44126-201ENSMUST00000204831 514 ntBASIC12.4□□□□□ -0.42
Rai1Q61818 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rai1Q61818 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.4□□□□□ -0.42
Rai1Q61818 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.4□□□□□ -0.42
Rai1Q61818 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rai1Q61818 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Rai1Q61818 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rai1Q61818 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rai1Q61818 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.39□□□□□ -0.43
Rai1Q61818 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.39□□□□□ -0.43
Rai1Q61818 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12616-201ENSMUST00000118594 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12624-201ENSMUST00000177615 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12621-201ENSMUST00000177760 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12615-201ENSMUST00000177970 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12622-201ENSMUST00000177975 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12627-201ENSMUST00000178412 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12625-201ENSMUST00000179122 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12614-201ENSMUST00000179586 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm12613-201ENSMUST00000180323 382 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm5523-201ENSMUST00000180415 997 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm27552-201ENSMUST00000183351 62 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm27844-201ENSMUST00000183613 62 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Mir7032-201ENSMUST00000185154 79 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.39□□□□□ -0.43
Rai1Q61818 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.39□□□□□ -0.43
Rai1Q61818 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.39□□□□□ -0.43
Rai1Q61818 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rai1Q61818 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rai1Q61818 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rai1Q61818 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rai1Q61818 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.38□□□□□ -0.43
Rai1Q61818 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.38□□□□□ -0.43
Rai1Q61818 Gm5369-201ENSMUST00000217499 588 ntBASIC12.38□□□□□ -0.43
Rai1Q61818 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.38□□□□□ -0.43
Rai1Q61818 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rai1Q61818 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.38□□□□□ -0.43
Rai1Q61818 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Rai1Q61818 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rai1Q61818 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms