Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC18.81■□□□□ 0.6
Arhgef40Q3UPH7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Arhgef40Q3UPH7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Arhgef40Q3UPH7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC18.81■□□□□ 0.6
Arhgef40Q3UPH7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Gm12266-201ENSMUST00000120311 962 ntBASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Gm6039-201ENSMUST00000121667 1250 ntBASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Gm10179-201ENSMUST00000086233 688 ntBASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Arhgef40Q3UPH7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gm14665-201ENSMUST00000122294 557 ntBASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gm9540-201ENSMUST00000188230 478 ntBASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gm19459-201ENSMUST00000176240 835 ntBASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 AY036118-201ENSMUST00000200021 923 ntBASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gm13812-201ENSMUST00000118061 1347 ntBASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gm13810-201ENSMUST00000118584 1347 ntBASIC18.79■□□□□ 0.6
Arhgef40Q3UPH7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Gm23949-201ENSMUST00000104027 127 ntBASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Gm15131-201ENSMUST00000119124 595 ntBASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Gm19353-201ENSMUST00000184561 445 ntBASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Ntng1-201ENSMUST00000051253 327 ntBASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Arhgef40Q3UPH7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Gm9230-201ENSMUST00000188228 532 ntBASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Arhgef40Q3UPH7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms