Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Gm14130-201ENSMUST00000118417 987 ntBASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upf3aQ3ULJ3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm11439-201ENSMUST00000118598 409 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm12058-201ENSMUST00000118614 437 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm27341-201ENSMUST00000183570 106 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm43138-201ENSMUST00000199123 708 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upf3aQ3ULJ3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Gm4909-201ENSMUST00000118749 794 ntBASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Gm13665-201ENSMUST00000120830 528 ntBASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Mir3547-201ENSMUST00000175461 88 ntBASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms