Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.31□□□□□ -0.6
Q3U1D9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Gm13342-201ENSMUST00000121055 207 ntBASIC11.31□□□□□ -0.6
Q3U1D9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.31□□□□□ -0.6
Q3U1D9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.31□□□□□ -0.6
Q3U1D9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.31□□□□□ -0.6
Q3U1D9 Gm3890-201ENSMUST00000182416 207 ntBASIC11.31□□□□□ -0.6
Q3U1D9 Gm27516-201ENSMUST00000184237 98 ntBASIC11.31□□□□□ -0.6
Q3U1D9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Q3U1D9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.31□□□□□ -0.6
Q3U1D9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Q3U1D9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Q3U1D9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.3□□□□□ -0.6
Q3U1D9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.3□□□□□ -0.6
Q3U1D9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Q3U1D9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.3□□□□□ -0.6
Q3U1D9 Gm13786-201ENSMUST00000122371 333 ntBASIC11.3□□□□□ -0.6
Q3U1D9 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.3□□□□□ -0.6
Q3U1D9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.3□□□□□ -0.6
Q3U1D9 Mospd4-201ENSMUST00000180618 576 ntBASIC11.3□□□□□ -0.6
Q3U1D9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.3□□□□□ -0.6
Q3U1D9 Gm8099-201ENSMUST00000200510 742 ntBASIC11.3□□□□□ -0.6
Q3U1D9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.3□□□□□ -0.6
Q3U1D9 Gm10608-202ENSMUST00000213924 676 ntBASIC11.3□□□□□ -0.6
Q3U1D9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.3□□□□□ -0.6
Q3U1D9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.3□□□□□ -0.6
Q3U1D9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.3□□□□□ -0.6
Q3U1D9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.3□□□□□ -0.6
Q3U1D9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Q3U1D9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Q3U1D9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.3□□□□□ -0.6
Q3U1D9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.3□□□□□ -0.6
Q3U1D9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Q3U1D9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.29□□□□□ -0.6
Q3U1D9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.29□□□□□ -0.6
Q3U1D9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Q3U1D9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Q3U1D9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Gm10434-201ENSMUST00000101158 471 ntBASIC11.29□□□□□ -0.6
Q3U1D9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.29□□□□□ -0.6
Q3U1D9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Q3U1D9 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.29□□□□□ -0.6
Q3U1D9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms