Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.48□□□□□ -0.41
Hoxc4Q08624 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm45925-201ENSMUST00000218882 744 ntBASIC12.48□□□□□ -0.41
Hoxc4Q08624 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.48□□□□□ -0.41
Hoxc4Q08624 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm22058-201ENSMUST00000083393 310 ntBASIC12.48□□□□□ -0.41
Hoxc4Q08624 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.47□□□□□ -0.41
Hoxc4Q08624 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.47□□□□□ -0.41
Hoxc4Q08624 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm20482-202ENSMUST00000174729 825 ntBASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm26956-201ENSMUST00000182176 986 ntBASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm27320-201ENSMUST00000184892 109 ntBASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.47□□□□□ -0.41
Hoxc4Q08624 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.47□□□□□ -0.41
Hoxc4Q08624 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.47□□□□□ -0.41
Hoxc4Q08624 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxc4Q08624 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxc4Q08624 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxc4Q08624 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.46□□□□□ -0.41
Hoxc4Q08624 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms