Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.92□□□□□ -0.18
VcpQ01853 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.92□□□□□ -0.18
VcpQ01853 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.92□□□□□ -0.18
VcpQ01853 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VcpQ01853 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 Gm2383-201ENSMUST00000181461 807 ntBASIC13.92□□□□□ -0.18
VcpQ01853 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm42627-201ENSMUST00000197347 224 ntBASIC13.92□□□□□ -0.18
VcpQ01853 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.92□□□□□ -0.18
VcpQ01853 Gm29705-201ENSMUST00000212598 474 ntBASIC13.92□□□□□ -0.18
VcpQ01853 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.92□□□□□ -0.18
VcpQ01853 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.92□□□□□ -0.18
VcpQ01853 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.92□□□□□ -0.18
VcpQ01853 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.92□□□□□ -0.18
VcpQ01853 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.92□□□□□ -0.18
VcpQ01853 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VcpQ01853 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcpQ01853 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
VcpQ01853 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Gm11793-201ENSMUST00000120433 981 ntBASIC13.91□□□□□ -0.18
VcpQ01853 Gm1335-201ENSMUST00000121653 386 ntBASIC13.91□□□□□ -0.18
VcpQ01853 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.91□□□□□ -0.18
VcpQ01853 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.91□□□□□ -0.18
VcpQ01853 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.91□□□□□ -0.18
VcpQ01853 Gm38223-201ENSMUST00000194484 695 ntBASIC13.91□□□□□ -0.18
VcpQ01853 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 Gm5161-201ENSMUST00000075243 853 ntBASIC13.91□□□□□ -0.18
VcpQ01853 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcpQ01853 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VcpQ01853 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VcpQ01853 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VcpQ01853 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VcpQ01853 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VcpQ01853 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.9□□□□□ -0.18
VcpQ01853 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.9□□□□□ -0.18
VcpQ01853 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcpQ01853 Gm27341-201ENSMUST00000183570 106 ntBASIC13.9□□□□□ -0.18
VcpQ01853 Gm27682-201ENSMUST00000183930 110 ntBASIC13.9□□□□□ -0.18
VcpQ01853 Gm44397-201ENSMUST00000195950 113 ntBASIC13.9□□□□□ -0.18
VcpQ01853 Gm43133-201ENSMUST00000197472 463 ntBASIC13.9□□□□□ -0.18
VcpQ01853 Gm42550-201ENSMUST00000201553 960 ntBASIC13.9□□□□□ -0.18
VcpQ01853 Olfr284-202ENSMUST00000206647 966 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms