Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1aP97445 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.03□□□□□ -0.48
Cacna1aP97445 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1aP97445 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1aP97445 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1aP97445 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1aP97445 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.03□□□□□ -0.48
Cacna1aP97445 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.03□□□□□ -0.48
Cacna1aP97445 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.03□□□□□ -0.48
Cacna1aP97445 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1aP97445 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Cacna1aP97445 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.02□□□□□ -0.48
Cacna1aP97445 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1aP97445 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Cacna1aP97445 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.02□□□□□ -0.49
Cacna1aP97445 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.02□□□□□ -0.49
Cacna1aP97445 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.02□□□□□ -0.49
Cacna1aP97445 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cacna1aP97445 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.02□□□□□ -0.49
Cacna1aP97445 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.02□□□□□ -0.49
Cacna1aP97445 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cacna1aP97445 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.02□□□□□ -0.49
Cacna1aP97445 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cacna1aP97445 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cacna1aP97445 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cacna1aP97445 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm4607-201ENSMUST00000206649 577 ntBASIC12.01□□□□□ -0.49
Cacna1aP97445 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm25517-201ENSMUST00000083865 134 ntBASIC12.01□□□□□ -0.49
Cacna1aP97445 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm25043-201ENSMUST00000158604 212 ntBASIC12.01□□□□□ -0.49
Cacna1aP97445 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.01□□□□□ -0.49
Cacna1aP97445 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cacna1aP97445 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cacna1aP97445 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms