Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.12□□□□□ -0.47
SgcdP82347 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SgcdP82347 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.12□□□□□ -0.47
SgcdP82347 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SgcdP82347 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
SgcdP82347 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.12□□□□□ -0.47
SgcdP82347 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcdP82347 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgcdP82347 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.11□□□□□ -0.47
SgcdP82347 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgcdP82347 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SgcdP82347 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.11□□□□□ -0.47
SgcdP82347 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.11□□□□□ -0.47
SgcdP82347 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SgcdP82347 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.11□□□□□ -0.47
SgcdP82347 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.11□□□□□ -0.47
SgcdP82347 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.11□□□□□ -0.47
SgcdP82347 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.11□□□□□ -0.47
SgcdP82347 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.11□□□□□ -0.47
SgcdP82347 Gm28631-201ENSMUST00000190740 334 ntBASIC12.11□□□□□ -0.47
SgcdP82347 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.11□□□□□ -0.47
SgcdP82347 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SgcdP82347 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.11□□□□□ -0.47
SgcdP82347 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.11□□□□□ -0.47
SgcdP82347 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.11□□□□□ -0.47
SgcdP82347 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.11□□□□□ -0.47
SgcdP82347 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SgcdP82347 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
SgcdP82347 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SgcdP82347 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.11□□□□□ -0.47
SgcdP82347 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SgcdP82347 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SgcdP82347 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcdP82347 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgcdP82347 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.1□□□□□ -0.47
SgcdP82347 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.1□□□□□ -0.47
SgcdP82347 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgcdP82347 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SgcdP82347 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SgcdP82347 Gm12859-201ENSMUST00000117834 427 ntBASIC12.1□□□□□ -0.47
SgcdP82347 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
SgcdP82347 Gm6222-201ENSMUST00000120787 396 ntBASIC12.1□□□□□ -0.47
SgcdP82347 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcdP82347 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.1□□□□□ -0.47
SgcdP82347 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms