Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.33□□□□□ -0.28
Ybx1P62960 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.33□□□□□ -0.28
Ybx1P62960 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ybx1P62960 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ybx1P62960 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.33□□□□□ -0.28
Ybx1P62960 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.33□□□□□ -0.28
Ybx1P62960 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Ybx1P62960 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ybx1P62960 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.32□□□□□ -0.28
Ybx1P62960 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Ybx1P62960 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Gm24830-201ENSMUST00000102024 166 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ybx1P62960 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Gm22121-201ENSMUST00000175148 54 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm25890-201ENSMUST00000177643 165 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm22614-201ENSMUST00000178300 165 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm18753-201ENSMUST00000201000 566 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm45186-201ENSMUST00000206874 478 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.32□□□□□ -0.28
Ybx1P62960 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.32□□□□□ -0.28
Ybx1P62960 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Gm22042-201ENSMUST00000082989 165 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm26232-201ENSMUST00000083360 166 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm24136-201ENSMUST00000083374 165 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Gm26110-201ENSMUST00000083971 165 ntBASIC13.32□□□□□ -0.28
Ybx1P62960 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ybx1P62960 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ybx1P62960 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.31□□□□□ -0.28
Ybx1P62960 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.31□□□□□ -0.28
Ybx1P62960 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.31□□□□□ -0.28
Ybx1P62960 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Gm25214-201ENSMUST00000104573 129 ntBASIC13.31□□□□□ -0.28
Ybx1P62960 Gm11531-201ENSMUST00000117614 555 ntBASIC13.31□□□□□ -0.28
Ybx1P62960 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.31□□□□□ -0.28
Ybx1P62960 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ybx1P62960 Mir3547-201ENSMUST00000175461 88 ntBASIC13.31□□□□□ -0.28
Ybx1P62960 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.31□□□□□ -0.28
Ybx1P62960 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.31□□□□□ -0.28
Ybx1P62960 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.31□□□□□ -0.28
Ybx1P62960 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.31□□□□□ -0.28
Ybx1P62960 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ybx1P62960 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ybx1P62960 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms