Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.45□□□□□ -0.58
Lsm6P62313 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Lsm6P62313 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm6P62313 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lsm6P62313 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lsm6P62313 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.44□□□□□ -0.58
Lsm6P62313 Gm11918-201ENSMUST00000121660 179 ntBASIC11.44□□□□□ -0.58
Lsm6P62313 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.44□□□□□ -0.58
Lsm6P62313 Gm38671-201ENSMUST00000200573 130 ntBASIC11.44□□□□□ -0.58
Lsm6P62313 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm6P62313 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.44□□□□□ -0.58
Lsm6P62313 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Lsm6P62313 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm6P62313 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Lsm6P62313 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Lsm6P62313 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Lsm6P62313 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Lsm6P62313 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Gm14928-201ENSMUST00000120198 477 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.43□□□□□ -0.58
Lsm6P62313 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Gm23984-201ENSMUST00000157139 203 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm6P62313 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm6P62313 Gm6458-201ENSMUST00000211573 635 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.43□□□□□ -0.58
Lsm6P62313 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm6P62313 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.42□□□□□ -0.58
Lsm6P62313 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.42□□□□□ -0.58
Lsm6P62313 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Lsm6P62313 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms