Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Gm14832-201ENSMUST00000121289 322 ntBASIC15.28■□□□□ 0.04
Lrch1P62046 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.28■□□□□ 0.04
Lrch1P62046 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.28■□□□□ 0.04
Lrch1P62046 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.28■□□□□ 0.04
Lrch1P62046 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrch1P62046 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lrch1P62046 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.27■□□□□ 0.04
Lrch1P62046 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.27■□□□□ 0.04
Lrch1P62046 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.27■□□□□ 0.04
Lrch1P62046 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.27■□□□□ 0.04
Lrch1P62046 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrch1P62046 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.27■□□□□ 0.04
Lrch1P62046 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lrch1P62046 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC15.27■□□□□ 0.03
Lrch1P62046 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrch1P62046 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lrch1P62046 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lrch1P62046 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Lrch1P62046 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Lrch1P62046 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrch1P62046 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Lrch1P62046 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Lrch1P62046 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrch1P62046 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Lrch1P62046 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrch1P62046 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrch1P62046 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Lrch1P62046 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.26■□□□□ 0.03
Lrch1P62046 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.26■□□□□ 0.03
Lrch1P62046 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.26■□□□□ 0.03
Lrch1P62046 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lrch1P62046 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Gm19353-201ENSMUST00000184561 445 ntBASIC15.26■□□□□ 0.03
Lrch1P62046 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.26■□□□□ 0.03
Lrch1P62046 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.26■□□□□ 0.03
Lrch1P62046 Gm45598-202ENSMUST00000210719 986 ntBASIC15.26■□□□□ 0.03
Lrch1P62046 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.26■□□□□ 0.03
Lrch1P62046 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.26■□□□□ 0.03
Lrch1P62046 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Lrch1P62046 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrch1P62046 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrch1P62046 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lrch1P62046 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.25■□□□□ 0.03
Lrch1P62046 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrch1P62046 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lrch1P62046 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrch1P62046 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrch1P62046 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Lrch1P62046 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms